MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,317
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 47
misc RNA:
Total features: 2,368
Total number of protein coding genes annotated/found:
2,317
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5039|JADGLG010000009.1
SEQF5039_02348
Genome Viewer
NA
AA
303/101
38662-38360
Inner membrane protein YiaW
SEQF5039|JADGLG010000009.1
SEQF5039_02347
Genome Viewer
NA
AA
345/115
38203-37859
Inner membrane protein YiaV
SEQF5039|JADGLG010000009.1
SEQF5039_02346
Genome Viewer
NA
AA
264/88
37789-37526
hypothetical protein
SEQF5039|JADGLG010000009.1
SEQF5039_02345
Genome Viewer
NA
AA
459/153
37325-36867
Methylated-DNA--protein-cysteine methyltransferase%2C constitutive
SEQF5039|JADGLG010000009.1
SEQF5039_02344
Genome Viewer
NA
AA
207/69
36680-36474
hypothetical protein
SEQF5039|JADGLG010000009.1
SEQF5039_02343
Genome Viewer
NA
AA
891/297
36484-35594
Tyrosine recombinase XerD
SEQF5039|JADGLG010000009.1
SEQF5039_02342
Genome Viewer
NA
AA
582/194
34633-35214
Molybdopterin adenylyltransferase
SEQF5039|JADGLG010000009.1
SEQF5039_02341
Genome Viewer
NA
AA
714/238
33565-34278
S-methyl-5'-thioinosine phosphorylase
SEQF5039|JADGLG010000009.1
SEQF5039_02340
Genome Viewer
NA
AA
1044/348
32233-33276
Alcohol dehydrogenase 1
SEQF5039|JADGLG010000009.1
SEQF5039_02339
Genome Viewer
NA
AA
459/153
30829-31287
Regulatory protein RecX
SEQF5039|JADGLG010000009.1
SEQF5039_02338
Genome Viewer
NA
AA
711/237
30051-30761
Phosphoglycolate phosphatase
SEQF5039|JADGLG010000009.1
SEQF5039_02337
Genome Viewer
NA
AA
153/51
29346-29498
hypothetical protein
SEQF5039|JADGLG010000009.1
SEQF5039_02336
Genome Viewer
NA
AA
873/291
28380-29252
hypothetical protein
SEQF5039|JADGLG010000009.1
SEQF5039_02335
Genome Viewer
NA
AA
735/245
28207-27473
Ribonuclease PH
SEQF5039|JADGLG010000009.1
SEQF5039_02334
Genome Viewer
NA
AA
1185/395
27013-25829
Coenzyme A biosynthesis bifunctional protein CoaBC
SEQF5039|JADGLG010000009.1
SEQF5039_02333
Genome Viewer
NA
AA
441/147
25074-25514
IS1595 family transposase ISKor1
SEQF5039|JADGLG010000009.1
SEQF5039_02332
Genome Viewer
NA
AA
501/167
24239-24739
HTH-type transcriptional regulator PgrR
SEQF5039|JADGLG010000009.1
SEQF5039_02331
Genome Viewer
NA
AA
588/196
22474-23061
GTP cyclohydrolase-2
SEQF5039|JADGLG010000009.1
SEQF5039_02330
Genome Viewer
NA
AA
669/223
21813-22481
hypothetical protein
SEQF5039|JADGLG010000009.1
SEQF5039_02328
Genome Viewer
NA
AA
582/194
21343-20762
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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